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Description : Single-strand binding protein family
Gene families : OG_42_0002038 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002038_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Sopen09g027630 | |
| Cluster | HCCA clusters: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g31010 | No alias | Protein OSB4, chloroplastic... | 0.02 | Orthogroups_2024-Update | |
| At4g20010 | No alias | PTAC9 [Source:UniProtKB/TrEMBL;Acc:A0A178UX75] | 0.04 | Orthogroups_2024-Update | |
| At5g44785 | No alias | Organellar single-stranded DNA binding protein 3... | 0.03 | Orthogroups_2024-Update | |
| Bradi1g14220 | No alias | Primosome PriB/single-strand DNA-binding | 0.05 | Orthogroups_2024-Update | |
| Brara.I02757.1 | No alias | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.05 | Orthogroups_2024-Update | |
| Brara.K01788.1 | No alias | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G128432 | No alias | Primosome PriB/single-strand DNA-binding | 0.06 | Orthogroups_2024-Update | |
| LOC_Os01g72049 | No alias | retrotransposon, putative, centromere-specific, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g43420 | No alias | single-stranded DNA-binding protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| Seita.9G162700.1 | No alias | ssDNA-binding protein *(OSB) | 0.04 | Orthogroups_2024-Update | |
| Sobic.001G161400.1 | No alias | ssDNA-binding protein *(OSB) | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G425100.1 | No alias | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.02 | Orthogroups_2024-Update | |
| Solyc09g065840 | No alias | single-stranded DNA binding protein-like protein | 0.09 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003697 | single-stranded DNA binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000424 | Primosome_PriB/ssb | 89 | 182 |
| No external refs found! |