Glyma.08G306100

Description : Mitochondrial transcription termination factor family protein

Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.08G306100
Cluster	HCCA clusters: Cluster_421

Target	Alias	Description	ECC score	Gene Family Method
At5g64950	No alias	Emb [Source:UniProtKB/TrEMBL;Acc:Q9LV83]	0.03	Orthogroups_2024-Update
Bradi1g16160	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
Bradi4g23197	No alias	Mitochondrial transcription termination factor family protein	0.05	Orthogroups_2024-Update
Brara.A02580.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.15G153400	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
HORVU2Hr1G024310.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
HORVU6Hr1G075340.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
HORVU7Hr1G040960.3	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
MA_26585g0010	No alias	(at5g64950 : 83.2) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
PSME_00000443-RA	No alias	(at5g64950 : 94.4) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
PSME_00000445-RA	No alias	(at5g64950 : 86.7) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
PSME_00023020-RA	No alias	(at1g79220 : 108.0) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
PSME_00030142-RA	No alias	(at5g64950 : 89.4) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
PSME_00042470-RA	No alias	(at1g79220 : 96.3) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
PSME_00056620-RA	No alias	(at1g79220 : 139.0) Mitochondrial transcription...	0.04	Orthogroups_2024-Update
Pp1s219_66V6	No alias	No description available	0.02	Orthogroups_2024-Update
Seita.4G092000.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
Seita.4G094400.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
Seita.4G095000.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.002G179800.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
Sopen04g028730	No alias	mTERF	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Predicted GO
MF	GO:0003735	structural constituent of ribosome	IEP	Predicted GO
MF	GO:0005198	structural molecule activity	IEP	Predicted GO
CC	GO:0005840	ribosome	IEP	Predicted GO
BP	GO:0006284	base-excision repair	IEP	Predicted GO
BP	GO:0006412	translation	IEP	Predicted GO
BP	GO:0006518	peptide metabolic process	IEP	Predicted GO
MF	GO:0008897	holo-[acyl-carrier-protein] synthase activity	IEP	Predicted GO
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Predicted GO
MF	GO:0016830	carbon-carbon lyase activity	IEP	Predicted GO
MF	GO:0016831	carboxy-lyase activity	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0043043	peptide biosynthetic process	IEP	Predicted GO
CC	GO:0043228	non-membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Predicted GO
BP	GO:0043603	cellular amide metabolic process	IEP	Predicted GO
BP	GO:0043604	amide biosynthetic process	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Predicted GO
CC	GO:1990904	ribonucleoprotein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003690	MTERF	97	248
IPR003690	MTERF	262	371

External Links

No external refs found!

Glyma.08G306100

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation