Sopen09g027780

Description : WRKY DNA -binding domain

Gene families : OG_42_0000493 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000493_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen09g027780
Cluster	HCCA clusters: Cluster_283

Target	Alias	Description	ECC score	Gene Family Method
Bradi5g04817	No alias	WRKY DNA-binding protein 11	0.02	Orthogroups_2024-Update
Brara.A01429.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.17G168900	No alias	WRKY DNA-binding protein 15	0.03	Orthogroups_2024-Update
MA_107950g0010	No alias	(at4g24240 : 186.0) Encodes a Ca-dependent calmodulin...	0.02	Orthogroups_2024-Update
MA_88419g0010	No alias	(at2g30590 : 170.0) Encodes WRKY DNA-binding protein 21...	0.05	Orthogroups_2024-Update
Potri.005G219500	No alias	WRKY DNA-binding protein 21	0.03	Orthogroups_2024-Update
Potri.006G072400	No alias	WRKY DNA-binding protein 11	0.04	Orthogroups_2024-Update
Pp1s163_112V6	No alias	transcription factor WRKY9	0.02	Orthogroups_2024-Update
Pp1s48_141V6	No alias	wrky transcription factor 1	0.02	Orthogroups_2024-Update
Pp1s7_13V6	No alias	wrky transcription	0.02	Orthogroups_2024-Update
Sobic.006G206000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Solyc06g008610	No alias	WRKY transcription factor 21	0.03	Orthogroups_2024-Update
Sopen06g003380	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	270	327
IPR018872	Zn-cluster-dom	221	266

External Links

No external refs found!

Sopen09g027780

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation