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  5. Glyma.08G327500

Glyma.08G327500


Description : Ribosomal protein S10p/S20e family protein


Gene families : OG_42_0006070 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G327500
Cluster HCCA clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
118761 No alias Ribosomal protein S10p/S20e family protein 0.03 Orthogroups_2024-Update
Bradi1g71425 No alias Ribosomal protein S10p/S20e family protein 0.04 Orthogroups_2024-Update
Brara.C03451.1 No alias component *(uS10c) of small plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Brara.E02799.1 No alias component *(uS10c) of small plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Cre03.g195650 No alias Ribosomal protein S10p/S20e family protein 0.03 Orthogroups_2024-Update
GRMZM2G047513 No alias Ribosomal protein S10p/S20e family protein 0.03 Orthogroups_2024-Update
Kfl00124_0260 kfl00124_0260_v1.1 (q9m4y3|rr10_mescr : 137.0) 30S ribosomal protein S10,... 0.02 Orthogroups_2024-Update
Potri.011G092800 No alias Ribosomal protein S10p/S20e family protein 0.04 Orthogroups_2024-Update
Pp1s101_174V6 No alias chloroplast 30s ribosomal protein s10 0.03 Orthogroups_2024-Update
Pp1s9_408V6 No alias chloroplast 30s ribosomal protein s10 0.02 Orthogroups_2024-Update
Seita.9G505300.1 No alias component *(uS10c) of small plastid ribosomal-subunit proteome 0.08 Orthogroups_2024-Update
Sobic.001G469933.1 No alias component *(uS10c) of small plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Sopen10g001990 No alias Ribosomal protein S10p/S20e 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR027486 Ribosomal_S10_dom 112 206
No external refs found!