Sopen09g027990

Description : Tetratricopeptide repeat

Gene families : OG_42_0000807 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000807_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen09g027990
Cluster	HCCA clusters: Cluster_107

Target	Alias	Description	ECC score	Gene Family Method
411103	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.02	Orthogroups_2024-Update
At2g31240	No alias	Putative kinesin light chain [Source:UniProtKB/TrEMBL;Acc:Q8VZQ8]	0.03	Orthogroups_2024-Update
Brara.D01887.1	No alias	Unknown function	0.08	Orthogroups_2024-Update
Glyma.10G035900	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G122300	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.05	Orthogroups_2024-Update
Potri.005G222900	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.03	Orthogroups_2024-Update
Pp1s19_316V6	No alias	kinesin light	0.02	Orthogroups_2024-Update
Pp1s270_81V6	No alias	kinesin light chain	0.02	Orthogroups_2024-Update
Seita.9G539000.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Sobic.001G502600.2	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc09g066290	No alias	Kinesin light chain, putative (AHRD V3.3 *** B9T299_RICCO)	0.09	Orthogroups_2024-Update
evm.model.tig00001021.10	No alias	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR019734	TPR_repeat	554	581

External Links

No external refs found!