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  5. Glyma.09G061100

Glyma.09G061100


Description : PIF1 helicase


Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.09G061100

Target Alias Description ECC score Gene Family Method Actions
Brara.J01523.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.04G116000 No alias PIF1 helicase 0.02 Orthogroups_2024-Update
Glyma.07G171700 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Glyma.15G193800 No alias PIF1 helicase 0.04 Orthogroups_2024-Update
LOC_Os04g23360 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA InterProScan predictions
MF GO:0003678 DNA helicase activity IEA InterProScan predictions
BP GO:0006281 DNA repair IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010285 DNA_helicase_pif1-like 1042 1249
IPR025476 Helitron_helicase-like 301 461
No external refs found!