Glyma.09G072200

Description : Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related

Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.09G072200
Cluster	HCCA clusters: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
A4A49_07736	No alias	auxin response factor 5	0.04	Orthogroups_2024-Update
A4A49_29171	No alias	auxin response factor 18	0.07	Orthogroups_2024-Update
At4g23980	No alias	Auxin response factor 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9XED8]	0.03	Orthogroups_2024-Update
At5g62000	No alias	Auxin response factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JM3]	0.04	Orthogroups_2024-Update
Bradi1g34340	No alias	Transcriptional factor B3 family protein /...	0.03	Orthogroups_2024-Update
Bradi1g46602	No alias	Transcriptional factor B3 family protein /...	0.04	Orthogroups_2024-Update
Bradi3g45880	No alias	auxin response factor 1	0.03	Orthogroups_2024-Update
Bradi5g25767	No alias	auxin response factor 6	0.04	Orthogroups_2024-Update
Brara.A01401.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G01369.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I04264.1	No alias	ARF-type transcription factor	0.06	Orthogroups_2024-Update
Brara.K00855.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G137413	No alias	auxin response factor 1	0.04	Orthogroups_2024-Update
Glyma.02G239600	No alias	auxin response factor 8	0.04	Orthogroups_2024-Update
Glyma.02G281700	No alias	auxin response factor 6	0.02	Orthogroups_2024-Update
Glyma.05G200800	No alias	auxin response factor 2	0.05	Orthogroups_2024-Update
Glyma.07G272800	No alias	auxin response factor 1	0.05	Orthogroups_2024-Update
Glyma.08G008100	No alias	auxin response factor 2	0.06	Orthogroups_2024-Update
Glyma.08G027800	No alias	Transcriptional factor B3 family protein /...	0.05	Orthogroups_2024-Update
Glyma.08G100100	No alias	auxin response factor 8	0.04	Orthogroups_2024-Update
Glyma.12G164100	No alias	auxin response factor 1	0.05	Orthogroups_2024-Update
Glyma.13G112600	No alias	Transcriptional factor B3 family protein /...	0.03	Orthogroups_2024-Update
Glyma.13G221400	No alias	auxin response factor 8	0.04	Orthogroups_2024-Update
Glyma.13G234200	No alias	Transcriptional factor B3 family protein /...	0.03	Orthogroups_2024-Update
Glyma.14G208500	No alias	auxin response factor 8	0.05	Orthogroups_2024-Update
Glyma.19G181900	No alias	auxin response factor 16	0.03	Orthogroups_2024-Update
LOC_Os11g32110	No alias	auxin response factor, putative, expressed	0.02	Orthogroups_2024-Update
Potri.003G142100	No alias	auxin response factor 9	0.03	Orthogroups_2024-Update
Potri.005G207700	No alias	auxin response factor 8	0.03	Orthogroups_2024-Update
Potri.008G039000	No alias	auxin response factor 16	0.03	Orthogroups_2024-Update
Seita.4G257800.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
Solyc01g103050	No alias	Auxin Response Factor 1	0.03	Orthogroups_2024-Update
Sopen12g021160	No alias	Auxin response factor	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	IEA	InterProScan predictions
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
MF	GO:0005096	GTPase activator activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0007155	cell adhesion	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
MF	GO:0008378	galactosyltransferase activity	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
BP	GO:0022610	biological adhesion	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
MF	GO:0042393	histone binding	IEP	Predicted GO
MF	GO:0043167	ion binding	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
BP	GO:0043170	macromolecule metabolic process	IEP	Predicted GO
BP	GO:0043412	macromolecule modification	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
BP	GO:0044238	primary metabolic process	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
BP	GO:0071704	organic substance metabolic process	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR010525	Auxin_resp	252	334
IPR033389	AUX/IAA_dom	995	1085
IPR003340	B3_DNA-bd	126	227

External Links

No external refs found!

Glyma.09G072200

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation