Glyma.09G094200

Description : ribosomal protein S11-beta

Gene families : OG_42_0002289 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002289_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.09G094200
Cluster	HCCA clusters: Cluster_371

Target	Alias	Description	ECC score	Gene Family Method
268639	No alias	Nucleic acid-binding, OB-fold-like protein	0.03	Orthogroups_2024-Update
A4A49_60485	No alias	40s ribosomal protein s11	0.05	Orthogroups_2024-Update
At3g48930	No alias	40S ribosomal protein S11-1...	0.03	Orthogroups_2024-Update
Bradi5g21630	No alias	Nucleic acid-binding, OB-fold-like protein	0.06	Orthogroups_2024-Update
Brara.A02200.1	No alias	component *(uS17) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Brara.B03705.1	No alias	component *(uS17) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Brara.F01642.1	No alias	component *(uS17) of small ribosomal-subunit (SSU) proteome	0.08	Orthogroups_2024-Update
Brara.F02607.1	No alias	component *(uS17) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Brara.I00599.1	No alias	component *(uS17) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Cre12.g514500	No alias	Nucleic acid-binding, OB-fold-like protein	0.06	Orthogroups_2024-Update
GRMZM2G019325	No alias	ribosomal protein S11-beta	0.07	Orthogroups_2024-Update
GRMZM2G044800	No alias	ribosomal protein S11-beta	0.04	Orthogroups_2024-Update
Glyma.13G165200	No alias	ribosomal protein S11-beta	0.04	Orthogroups_2024-Update
HORVU2Hr1G099230.8	No alias	component *(uS17) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
HORVU6Hr1G056610.7	No alias	component *(uS17) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Kfl00435_0080	kfl00435_0080_v1.1	(p17093\|rs11_soybn : 243.0) 40S ribosomal protein S11 -...	0.03	Orthogroups_2024-Update
LOC_Os04g52361	No alias	ribosomal protein S17, putative, expressed	0.02	Orthogroups_2024-Update
MA_19350g0010	No alias	(at3g48930 : 247.0) embryo defective 1080 (EMB1080);...	0.02	Orthogroups_2024-Update
Mp4g23360.1	No alias	component RPS11 of SSU proteome	0.04	Orthogroups_2024-Update
Mp6g10500.1	No alias	component RPS11 of SSU proteome	0.03	Orthogroups_2024-Update
Potri.014G053300	No alias	ribosomal protein S11-beta	0.05	Orthogroups_2024-Update
Potri.018G115400	No alias	ribosomal protein S11-beta	0.03	Orthogroups_2024-Update
Pp1s21_269V6	No alias	40s ribosomal protein s11	0.09	Orthogroups_2024-Update
Pp1s30_89V6	No alias	40s ribosomal protein s11	0.03	Orthogroups_2024-Update
Pp1s51_307V6	No alias	40s ribosomal protein s11	0.08	Orthogroups_2024-Update
Pp1s79_58V6	No alias	40s ribosomal protein s11	0.06	Orthogroups_2024-Update
Seita.1G231100.1	No alias	component *(uS17) of small ribosomal-subunit (SSU) proteome	0.1	Orthogroups_2024-Update
Seita.7G157100.1	No alias	component *(uS17) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Seita.7G234800.1	No alias	component *(uS17) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Sobic.004G213200.1	No alias	component *(uS17) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Sobic.006G138100.1	No alias	component *(uS17) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Sobic.006G213000.1	No alias	component *(uS17) of small ribosomal-subunit (SSU) proteome	0.1	Orthogroups_2024-Update
Solyc06g073790	No alias	40s ribosomal protein S11 (AHRD V3.3 *** K7XKQ3_SOLTU)	0.05	Orthogroups_2024-Update
Solyc06g073800	No alias	40s ribosomal protein S11 (AHRD V3.3 *** K7XKQ3_SOLTU)	0.06	Orthogroups_2024-Update
Solyc12g042080	No alias	40s ribosomal protein S11 (AHRD V3.3 *** K7XKQ3_SOLTU)	0.05	Orthogroups_2024-Update
Sopen06g030190	No alias	Ribosomal protein S17	0.06	Orthogroups_2024-Update
Sopen12g021180	No alias	Ribosomal protein S17	0.07	Orthogroups_2024-Update
evm.model.contig_3727.5	No alias	(at4g30800 : 197.0) Nucleic acid-binding, OB-fold-like...	0.1	Orthogroups_2024-Update
evm.model.tig00000551.22	No alias	(p17093\|rs11_soybn : 211.0) 40S ribosomal protein S11 -...	0.08	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Predicted GO
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0001671	ATPase activator activity	IEP	Predicted GO
BP	GO:0002376	immune system process	IEP	Predicted GO
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEP	Predicted GO
BP	GO:0006555	methionine metabolic process	IEP	Predicted GO
BP	GO:0006955	immune response	IEP	Predicted GO
BP	GO:0007275	multicellular organism development	IEP	Predicted GO
MF	GO:0008172	S-methyltransferase activity	IEP	Predicted GO
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009086	methionine biosynthetic process	IEP	Predicted GO
CC	GO:0015934	large ribosomal subunit	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
BP	GO:0032501	multicellular organismal process	IEP	Predicted GO
BP	GO:0032502	developmental process	IEP	Predicted GO
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	IEP	Predicted GO
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Predicted GO
CC	GO:0044391	ribosomal subunit	IEP	Predicted GO
BP	GO:0045087	innate immune response	IEP	Predicted GO
BP	GO:0048856	anatomical structure development	IEP	Predicted GO
MF	GO:0051087	chaperone binding	IEP	Predicted GO
MF	GO:0060590	ATPase regulator activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000266	Ribosomal_S17/S11	74	142
IPR032440	Ribosomal_S11_N	4	72

External Links

No external refs found!

Glyma.09G094200

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation