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  5. Glyma.09G094300

Glyma.09G094300


Description : ribosomal protein S11-beta


Gene families : OG_42_0002289 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002289_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.09G094300
Cluster HCCA clusters: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
A4A49_60485 No alias 40s ribosomal protein s11 0.03 Orthogroups_2024-Update
Cre12.g514500 No alias Nucleic acid-binding, OB-fold-like protein 0.01 Orthogroups_2024-Update
GRMZM2G019325 No alias ribosomal protein S11-beta 0.03 Orthogroups_2024-Update
Mp4g23360.1 No alias component RPS11 of SSU proteome 0.03 Orthogroups_2024-Update
Potri.014G053300 No alias ribosomal protein S11-beta 0.03 Orthogroups_2024-Update
Pp1s21_269V6 No alias 40s ribosomal protein s11 0.05 Orthogroups_2024-Update
Pp1s79_58V6 No alias 40s ribosomal protein s11 0.02 Orthogroups_2024-Update
Seita.1G231100.1 No alias component *(uS17) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Sobic.006G138100.1 No alias component *(uS17) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sobic.006G213000.1 No alias component *(uS17) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Solyc06g073790 No alias 40s ribosomal protein S11 (AHRD V3.3 *** K7XKQ3_SOLTU) 0.03 Orthogroups_2024-Update
Sopen06g030190 No alias Ribosomal protein S17 0.03 Orthogroups_2024-Update
Sopen12g021180 No alias Ribosomal protein S17 0.03 Orthogroups_2024-Update
evm.model.contig_3727.5 No alias (at4g30800 : 197.0) Nucleic acid-binding, OB-fold-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 74 142
IPR032440 Ribosomal_S11_N 4 72
No external refs found!