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  5. Sopen09g029350

Sopen09g029350


Description : Tub family


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g029350
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G074940.1 No alias TUB-type transcription factor 0.04 Orthogroups_2024-Update
HORVU5Hr1G040000.2 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g48370 No alias OsFBT1 - F-box and tubby domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_106995g0010 No alias (at1g25280 : 183.0) Member of TLP family; tubby like... 0.03 Orthogroups_2024-Update
PSME_00022127-RA No alias (at2g47900 : 505.0) Member of TLP family; tubby like... 0.03 Orthogroups_2024-Update
PSME_00046188-RA No alias (at2g47900 : 280.0) Member of TLP family; tubby like... 0.03 Orthogroups_2024-Update
Potri.001G390200 No alias tubby like protein 7 0.02 Orthogroups_2024-Update
Potri.005G228500 No alias tubby like protein 6 0.03 Orthogroups_2024-Update
Pp1s222_14V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.2G422900.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
evm.model.tig00020603.38 No alias (at2g47900 : 117.0) Member of TLP family; tubby like... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 44 93
IPR000007 Tubby_C 108 391
No external refs found!