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  5. Glyma.09G113000

Glyma.09G113000


Description : myb-like HTH transcriptional regulator family protein


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.09G113000
Cluster HCCA clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Brara.A03315.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Glyma.11G183400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G068320.2 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G095530.2 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
MA_52379g0010 No alias (at2g40260 : 115.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
MA_84935g0010 No alias (at1g14600 : 113.0) Homeodomain-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00003323-RA No alias (at3g24120 : 251.0) Homeodomain-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00022449-RA No alias (at2g40260 : 137.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00040944-RA No alias (at3g04030 : 275.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00043566-RA No alias (at3g04030 : 229.0) Homeodomain-like superfamily... 0.04 Orthogroups_2024-Update
Potri.004G082400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.011G067150 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Seita.9G419000.1 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
Solyc09g091880 No alias Myb family transcription factor APL (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc10g076460 No alias MYB-like transcription factor family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 261 310
IPR025756 Myb_CC_LHEQLE 340 387
No external refs found!