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  5. Glyma.09G172100

Glyma.09G172100


Description : CYS, MET, PRO, and GLY protein 1


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.09G172100
Cluster HCCA clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
A4A49_10671 No alias u-box domain-containing protein 27 0.03 Orthogroups_2024-Update
Brara.E02326.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G071484 No alias plant U-box 22 0.02 Orthogroups_2024-Update
GRMZM2G168980 No alias plant U-box 23 0.02 Orthogroups_2024-Update
Glyma.02G083900 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Mp3g11730.1 No alias E3 ubiquitin ligase (PUB) 0.03 Orthogroups_2024-Update
Mp3g22750.1 No alias U-box domain-containing protein 26 OS=Arabidopsis... 0.02 Orthogroups_2024-Update
PSME_00043995-RA No alias (at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS... 0.03 Orthogroups_2024-Update
Potri.001G216100 No alias plant U-box 23 0.03 Orthogroups_2024-Update
Potri.002G070500 No alias plant U-box 29 0.03 Orthogroups_2024-Update
Potri.017G135000 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Pp1s198_49V6 No alias F14J22.1; U-box domain-containing protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Sobic.001G272900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G075400.2 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.006G274933.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc01g080920 No alias LOW QUALITY:U-box domain-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000930 gamma-tubulin complex IEP Predicted GO
CC GO:0000931 gamma-tubulin large complex IEP Predicted GO
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
CC GO:0008274 gamma-tubulin ring complex IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0031503 protein-containing complex localization IEP Predicted GO
BP GO:0033566 gamma-tubulin complex localization IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034629 cellular protein-containing complex localization IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
CC GO:0044450 microtubule organizing center part IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 28 98
No external refs found!