1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.09G174800

Glyma.09G174800


Description : ATP binding;nucleic acid binding;helicases


Gene families : OG_42_0000374 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.09G174800
Cluster HCCA clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
A4A49_33758 No alias putative pentatricopeptide repeat-containing protein,... 0.03 Orthogroups_2024-Update
A4A49_63302 No alias putative pentatricopeptide repeat-containing protein,... 0.03 Orthogroups_2024-Update
At5g41170 No alias Pentatricopeptide repeat-containing protein At5g41170,... 0.02 Orthogroups_2024-Update
Glyma.07G173300 No alias ATP binding;nucleic acid binding;helicases 0.04 Orthogroups_2024-Update
Glyma.08G108400 No alias ATP binding;nucleic acid binding;helicases 0.04 Orthogroups_2024-Update
Potri.005G046000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G021200 No alias ATP binding;nucleic acid binding;helicases 0.04 Orthogroups_2024-Update
Solyc06g007820 No alias Pentatricopeptide repeat protein (AHRD V3.3 *-* A0A1B3IPW0_CAPAN) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 299 330
IPR002885 Pentatricopeptide_repeat 196 226
IPR002885 Pentatricopeptide_repeat 61 106
IPR002885 Pentatricopeptide_repeat 478 525
IPR002885 Pentatricopeptide_repeat 408 456
IPR002885 Pentatricopeptide_repeat 233 281
IPR002885 Pentatricopeptide_repeat 337 386
IPR002885 Pentatricopeptide_repeat 127 176
No external refs found!