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  5. Sopen09g029950

Sopen09g029950


Description : LSM domain


Gene families : OG_42_0003055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g029950
Cluster HCCA clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
Bradi2g61835 No alias Small nuclear ribonucleoprotein family protein 0.03 Orthogroups_2024-Update
Brara.D00051.1 No alias component *(Sm-D2) of U1/U2/U4/U5-associated Sm... 0.03 Orthogroups_2024-Update
GRMZM2G076399 No alias Small nuclear ribonucleoprotein family protein 0.04 Orthogroups_2024-Update
Glyma.10G186300 No alias Small nuclear ribonucleoprotein family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G086790.2 No alias component *(Sm-D2) of U1/U2/U4/U5-associated Sm... 0.02 Orthogroups_2024-Update
PSME_00013696-RA No alias (at3g62840 : 192.0) Small nuclear ribonucleoprotein... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 30 104
No external refs found!