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  5. Glyma.09G200500

Glyma.09G200500


Description : Deoxyxylulose-5-phosphate synthase


Gene families : OG_42_0001316 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001316_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.09G200500
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Sobic.002G064500.1 No alias 1-deoxy-D-xylulose 5-phosphate synthase *(DXS) & EC_2.2... 0.03 Orthogroups_2024-Update
evm.model.contig_3433.1 No alias (o78328|dxs_capan : 748.0) Probable... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEA InterProScan predictions
BP GO:0016114 terpenoid biosynthetic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0031647 regulation of protein stability IEP Predicted GO
MF GO:0042301 phosphate ion binding IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0050821 protein stabilization IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
InterPro domains Description Start Stop
IPR005477 Dxylulose-5-P_synthase 70 355
IPR005475 Transketolase-like_Pyr-bd 391 553
IPR033248 Transketolase_C 571 694
No external refs found!