Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.09G209700 | |
Cluster | HCCA clusters: Cluster_63 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
134463 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
182822 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
At1g03540 | No alias | Pentatricopeptide repeat-containing protein At1g03540... | 0.03 | Orthogroups_2024-Update | |
At3g16610 | No alias | Pentatricopeptide repeat-containing protein At3g16610... | 0.03 | Orthogroups_2024-Update | |
At3g25060 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Orthogroups_2024-Update | |
At4g30700 | No alias | MEF29 [Source:UniProtKB/TrEMBL;Acc:A0A178UUW3] | 0.03 | Orthogroups_2024-Update | |
Bradi1g75980 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi5g01440 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.E01751.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Brara.J01844.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
GRMZM2G170896 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.11G061600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
HORVU3Hr1G073540.14 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU5Hr1G113990.21 | No alias | RNA editing factor *(CRR28) | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G038460.2 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
LOC_Os02g46980 | No alias | pentatricopeptide, putative, expressed | 0.04 | Orthogroups_2024-Update | |
LOC_Os07g39910 | No alias | pentatricopeptide repeat domain containing protein,... | 0.02 | Orthogroups_2024-Update | |
LOC_Os08g38610 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os11g10740 | No alias | tetratricopeptide-like helical, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_10432670g0020 | No alias | (at3g02010 : 676.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
MA_668740g0020 | No alias | (at3g13770 : 627.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00002375-RA | No alias | (at3g03580 : 696.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
PSME_00005130-RA | No alias | (at4g33990 : 552.0) embryo defective 2758 (EMB2758);... | 0.03 | Orthogroups_2024-Update | |
PSME_00005903-RA | No alias | (at2g22070 : 612.0) pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
Seita.4G100100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.4G168200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.5G424500.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.8G250500.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.9G162400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Solyc02g069500 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc08g076150 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.05 | Orthogroups_2024-Update | |
Solyc10g007940 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.03 | Orthogroups_2024-Update | |
Solyc12g096510 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
Sopen03g038830 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen05g007940 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen08g024790 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004097 | catechol oxidase activity | IEP | Predicted GO |
BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
BP | GO:0006720 | isoprenoid metabolic process | IEP | Predicted GO |
BP | GO:0006721 | terpenoid metabolic process | IEP | Predicted GO |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Predicted GO |
BP | GO:0008610 | lipid biosynthetic process | IEP | Predicted GO |
MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEP | Predicted GO |
MF | GO:0015267 | channel activity | IEP | Predicted GO |
BP | GO:0016114 | terpenoid biosynthetic process | IEP | Predicted GO |
MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | Predicted GO |
MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | Predicted GO |
MF | GO:0016744 | transferase activity, transferring aldehyde or ketonic groups | IEP | Predicted GO |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0044255 | cellular lipid metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 156 | 184 |
IPR002885 | Pentatricopeptide_repeat | 330 | 353 |
IPR002885 | Pentatricopeptide_repeat | 127 | 153 |
IPR002885 | Pentatricopeptide_repeat | 229 | 254 |
IPR032867 | DYW_dom | 428 | 552 |
IPR002885 | Pentatricopeptide_repeat | 53 | 98 |
IPR002885 | Pentatricopeptide_repeat | 255 | 302 |
No external refs found! |