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  5. Sopen09g030440

Sopen09g030440


Description : FAR1 DNA-binding domain


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g030440
Cluster HCCA clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
A4A49_15907 No alias protein far1-related sequence 2 0.02 Orthogroups_2024-Update
Brara.B03519.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.06G229800 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
HORVU2Hr1G102940.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Potri.010G140600 No alias FAR1-related sequence 11 0.02 Orthogroups_2024-Update
Seita.4G225600.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Solyc02g068550 No alias FAR1-related sequence 1 (AHRD V3.3 *** AT4G19990.5) 0.03 Orthogroups_2024-Update
Solyc07g043260 No alias Far1-related sequence 2-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004330 FAR1_DNA_bnd_dom 59 152
IPR018289 MULE_transposase_dom 275 366
IPR007527 Znf_SWIM 559 585
No external refs found!