1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.09G229100

Glyma.09G229100


Description : Putative lysine decarboxylase family protein


Gene families : OG_42_0000308 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000308_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.09G229100
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
At5g11950 No alias Cytokinin riboside 5'-monophosphate phosphoribohydrolase... 0.03 Orthogroups_2024-Update
Bradi1g00900 No alias Putative lysine decarboxylase family protein 0.02 Orthogroups_2024-Update
Glyma.10G089000 No alias Putative lysine decarboxylase family protein 0.02 Orthogroups_2024-Update
Glyma.17G257200 No alias Putative lysine decarboxylase family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G050770.10 No alias cytokinin phosphoribohydrolase *(LOG) 0.05 Orthogroups_2024-Update
LOC_Os03g64070 No alias uncharacterized protein PA4923, putative, expressed 0.03 Orthogroups_2024-Update
MA_12058g0010 No alias (at2g28305 : 266.0) LONELY GUY 1 (LOG1); CONTAINS... 0.03 Orthogroups_2024-Update
MA_47673g0010 No alias (at5g11950 : 323.0) Encodes a protein of unknown... 0.04 Orthogroups_2024-Update
Sopen10g032530 No alias Possible lysine decarboxylase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR031100 LOG_fam 61 191
No external refs found!