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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Glycine release: Glyma.09G232200 | |
| Cluster | HCCA clusters: Cluster_430 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 82024 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| 84657 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| At4g30700 | No alias | MEF29 [Source:UniProtKB/TrEMBL;Acc:A0A178UUW3] | 0.04 | Orthogroups_2024-Update | |
| Bradi1g75980 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.F01301.1 | No alias | RNA editing factor *(OTP970) | 0.03 | Orthogroups_2024-Update | |
| Glyma.03G227900 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.12G146900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.15G273200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.16G035600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.18G259800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| HORVU2Hr1G023100.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| LOC_Os01g74600 | No alias | vegetative storage protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_110266g0010 | No alias | (at1g11290 : 558.0) Pentatricopeptide Repeat Protein... | 0.04 | Orthogroups_2024-Update | |
| MA_127785g0010 | No alias | (at2g03880 : 512.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| MA_230261g0010 | No alias | (at4g13650 : 756.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| MA_296059g0020 | No alias | (at4g02750 : 572.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| MA_42352g0010 | No alias | (at2g13600 : 487.0) Pentatricopeptide repeat (PPR)... | 0.04 | Orthogroups_2024-Update | |
| PSME_00017819-RA | No alias | (at3g03580 : 689.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00025402-RA | No alias | (at3g02010 : 629.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00056947-RA | No alias | (at2g22070 : 647.0) pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
| Potri.014G191200 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s68_207V6 | No alias | ppr gene for putative pentatricopeptide repeat-like protein PPR | 0.04 | Orthogroups_2024-Update | |
| Sobic.003G277100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.006G275900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sopen07g001950 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002097 | tRNA wobble base modification | IEP | Predicted GO |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Predicted GO |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Predicted GO |
| MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006260 | DNA replication | IEP | Predicted GO |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
| BP | GO:0006400 | tRNA modification | IEP | Predicted GO |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
| BP | GO:0006914 | autophagy | IEP | Predicted GO |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predicted GO |
| BP | GO:0009451 | RNA modification | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
| CC | GO:0030880 | RNA polymerase complex | IEP | Predicted GO |
| CC | GO:0033588 | Elongator holoenzyme complex | IEP | Predicted GO |
| MF | GO:0034061 | DNA polymerase activity | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
| MF | GO:0043531 | ADP binding | IEP | Predicted GO |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Predicted GO |
| MF | GO:0071949 | FAD binding | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
| CC | GO:1902494 | catalytic complex | IEP | Predicted GO |
| CC | GO:1902554 | serine/threonine protein kinase complex | IEP | Predicted GO |
| CC | GO:1902911 | protein kinase complex | IEP | Predicted GO |
| CC | GO:1990234 | transferase complex | IEP | Predicted GO |
| CC | GO:1990316 | Atg1/ULK1 kinase complex | IEP | Predicted GO |
| No external refs found! |