Glyma.09G245400

Description : cyclin p4;1

Gene families : OG_42_0000447 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000447_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.09G245400
Cluster	HCCA clusters: Cluster_130

Target	Alias	Description	ECC score	Gene Family Method
At3g21870	No alias	Cyclin-U1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJ45]	0.05	Orthogroups_2024-Update
Bradi3g02530	No alias	cyclin p4;1	0.03	Orthogroups_2024-Update
GRMZM2G132774	No alias	cyclin p3;1	0.04	Orthogroups_2024-Update
GRMZM2G148621	No alias	cyclin p2;1	0.04	Orthogroups_2024-Update
LOC_Os04g46660	No alias	cyclin, putative, expressed	0.04	Orthogroups_2024-Update
LOC_Os10g41430	No alias	cyclin, putative, expressed	0.02	Orthogroups_2024-Update
MA_80306g0010	No alias	(at2g44740 : 154.0) cyclin p4;1 (CYCP4;1); CONTAINS...	0.03	Orthogroups_2024-Update
MA_92019g0010	No alias	(at3g60550 : 224.0) cyclin p3;2 (CYCP3;2); CONTAINS...	0.03	Orthogroups_2024-Update
MA_92793g0010	No alias	(at2g45080 : 206.0) cyclin p3;1 (cycp3;1); CONTAINS...	0.04	Orthogroups_2024-Update
Mp7g06850.1	No alias	cyclin (CYCP)	0.02	Orthogroups_2024-Update
Potri.002G143400	No alias	cyclin p3;2	0.04	Orthogroups_2024-Update
Pp1s44_106V6	No alias	No description available	0.03	Orthogroups_2024-Update
Seita.1G103800.1	No alias	regulatory protein *(CYCP(CYCU) of cell cycle	0.03	Orthogroups_2024-Update
Sobic.006G225200.2	No alias	regulatory protein *(CYCP(CYCU) of cell cycle	0.02	Orthogroups_2024-Update
Sopen01g042470	No alias	Cyclin	0.03	Orthogroups_2024-Update
evm.model.contig_2008.1	No alias	(at2g44740 : 101.0) cyclin p4;1 (CYCP4;1); CONTAINS...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEA	InterProScan predictions
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	IEA	InterProScan predictions
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0032268	regulation of cellular protein metabolic process	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071900	regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004089	carbonate dehydratase activity	IEP	Predicted GO
MF	GO:0004097	catechol oxidase activity	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
CC	GO:0005576	extracellular region	IEP	Predicted GO
CC	GO:0005618	cell wall	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006073	cellular glucan metabolic process	IEP	Predicted GO
BP	GO:0006694	steroid biosynthetic process	IEP	Predicted GO
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	Predicted GO
BP	GO:0008202	steroid metabolic process	IEP	Predicted GO
MF	GO:0008270	zinc ion binding	IEP	Predicted GO
MF	GO:0008417	fucosyltransferase activity	IEP	Predicted GO
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0009893	positive regulation of metabolic process	IEP	Predicted GO
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0010628	positive regulation of gene expression	IEP	Predicted GO
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Predicted GO
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
MF	GO:0016836	hydro-lyase activity	IEP	Predicted GO
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predicted GO
CC	GO:0030312	external encapsulating structure	IEP	Predicted GO
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	Predicted GO
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Predicted GO
BP	GO:0042546	cell wall biogenesis	IEP	Predicted GO
BP	GO:0044042	glucan metabolic process	IEP	Predicted GO
BP	GO:0044085	cellular component biogenesis	IEP	Predicted GO
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0045893	positive regulation of transcription, DNA-templated	IEP	Predicted GO
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
CC	GO:0048046	apoplast	IEP	Predicted GO
BP	GO:0048518	positive regulation of biological process	IEP	Predicted GO
BP	GO:0048522	positive regulation of cellular process	IEP	Predicted GO
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Predicted GO
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Predicted GO
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013922	Cyclin_PHO80-like	30	146

External Links

No external refs found!

Glyma.09G245400

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation