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  5. Glyma.09G256100

Glyma.09G256100


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.09G256100
Cluster HCCA clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
A4A49_06602 No alias putative polygalacturonase 0.04 Orthogroups_2024-Update
A4A49_11852 No alias putative polygalacturonase 0.04 Orthogroups_2024-Update
A4A49_17242 No alias putative polygalacturonase 0.03 Orthogroups_2024-Update
A4A49_22271 No alias putative polygalacturonase 0.03 Orthogroups_2024-Update
A4A49_27803 No alias putative polygalacturonase 0.03 Orthogroups_2024-Update
At3g16850 No alias Pectin lyase-like superfamily protein... 0.04 Orthogroups_2024-Update
GRMZM2G119494 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.08G017300 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.002G186900 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G139100 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.006G139500 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G112100 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Sobic.005G204700.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.010G005000.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Solyc05g049980 No alias Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G61490.4) 0.04 Orthogroups_2024-Update
Solyc06g060170 No alias Pectin lyase-like superfamily protein (AHRD V3.3 *** AT4G33440.1) 0.04 Orthogroups_2024-Update
Sopen09g030250 No alias Glycosyl hydrolases family 28 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0004575 sucrose alpha-glucosidase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015926 glucosidase activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0090599 alpha-glucosidase activity IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR024535 Pectate_lyase_SF_prot 57 126
IPR000743 Glyco_hydro_28 150 433
No external refs found!