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  5. Sopen09g030880

Sopen09g030880


Description : MuDR family transposase


Gene families : OG_42_0001054 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001054_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g030880
Cluster HCCA clusters: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
Solyc02g031730 No alias No description available 0.04 Orthogroups_2024-Update
Solyc04g014590 No alias No description available 0.03 Orthogroups_2024-Update
Solyc09g008110 No alias No description available 0.03 Orthogroups_2024-Update
Solyc12g015670 No alias No description available 0.02 Orthogroups_2024-Update
Sopen02g038420 No alias MuDR family transposase 0.03 Orthogroups_2024-Update
Sopen06g014550 No alias MuDR family transposase 0.03 Orthogroups_2024-Update
Sopen12g007590 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 729 758
IPR018289 MULE_transposase_dom 479 575
IPR004332 Transposase_MuDR 285 344
No external refs found!