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  5. Glyma.09G272500

Glyma.09G272500


Description : Phototropic-responsive NPH3 family protein


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.09G272500
Cluster HCCA clusters: Cluster_355

Target Alias Description ECC score Gene Family Method Actions
A4A49_03215 No alias btbpoz domain-containing protein 0.04 Orthogroups_2024-Update
A4A49_32094 No alias btbpoz domain-containing protein 0.02 Orthogroups_2024-Update
A4A49_42018 No alias btbpoz domain-containing protein npy2 0.02 Orthogroups_2024-Update
At2g23050 No alias BTB/POZ domain-containing protein NPY4... 0.04 Orthogroups_2024-Update
Brara.F03270.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G025880 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Glyma.02G039400 No alias Phototropic-responsive NPH3 family protein 0.06 Orthogroups_2024-Update
Glyma.05G105000 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Glyma.07G180900 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Glyma.08G135600 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.10G210200 No alias Phototropic-responsive NPH3 family protein 0.05 Orthogroups_2024-Update
Glyma.17G223000 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
MA_10430653g0010 No alias (at1g30440 : 376.0) Phototropic-responsive NPH3 family... 0.05 Orthogroups_2024-Update
MA_10431089g0010 No alias (at3g44820 : 615.0) Phototropic-responsive NPH3 family... 0.05 Orthogroups_2024-Update
MA_107543g0010 No alias (at1g67900 : 561.0) Phototropic-responsive NPH3 family... 0.03 Orthogroups_2024-Update
PSME_00019671-RA No alias (at5g64330 : 730.0) Involved in blue light response... 0.02 Orthogroups_2024-Update
PSME_00021708-RA No alias (at5g66560 : 98.6) Phototropic-responsive NPH3 family... 0.03 Orthogroups_2024-Update
Potri.004G189800 No alias Phototropic-responsive NPH3 family protein 0.06 Orthogroups_2024-Update
Potri.019G131600 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Pp1s203_13V6 No alias transposon protein mutator sub-class 0.03 Orthogroups_2024-Update
Solyc02g090070 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc02g092480 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen02g037130 No alias NPH3 family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 34 118
IPR027356 NPH3_dom 204 461
No external refs found!