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  5. Glyma.09G284500

Glyma.09G284500


Description : TCP family transcription factor


Gene families : OG_42_0000261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.09G284500
Cluster HCCA clusters: Cluster_452

Target Alias Description ECC score Gene Family Method Actions
Bradi4g35520 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Brara.B00281.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.05 Orthogroups_2024-Update
Glyma.03G018800 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Glyma.10G240200 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G035980.1 No alias TCP-type transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G059930.1 No alias TCP-type transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G075650.1 No alias TCP-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os12g07480 No alias TCP family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.005G090300 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Seita.2G279300.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G225400.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.03 Orthogroups_2024-Update
Sopen02g015800 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update
Sopen11g010700 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 45 117
No external refs found!