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  5. Glyma.09G286100

Glyma.09G286100


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.09G286100
Cluster HCCA clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
51483 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
99756 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
A4A49_21718 No alias pentatricopeptide repeat-containing protein 0.02 Orthogroups_2024-Update
A4A49_25971 No alias pentatricopeptide repeat-containing protein 0.03 Orthogroups_2024-Update
At2g34400 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.05 Orthogroups_2024-Update
At3g24000 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.04 Orthogroups_2024-Update
At5g16860 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.05 Orthogroups_2024-Update
At5g48910 No alias Pentatricopeptide repeat-containing protein At5g48910... 0.04 Orthogroups_2024-Update
Bradi2g45250 No alias mitochondrial RNAediting factor 1 0.03 Orthogroups_2024-Update
Bradi3g03440 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g41651 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
Brara.F02971.1 No alias RNA editing factor *(LPA66) 0.04 Orthogroups_2024-Update
GRMZM2G096602 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update
Glyma.01G173200 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.01G234100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G227300 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.09G168800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G193700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G001760.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU0Hr1G015630.5 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G035330.2 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU2Hr1G107430.1 No alias RNA editing factor *(MEF10) 0.03 Orthogroups_2024-Update
HORVU3Hr1G023070.1 No alias RNA editing factor *(OTP81) 0.02 Orthogroups_2024-Update
HORVU3Hr1G023090.1 No alias RNA editing factor *(OTP81) 0.02 Orthogroups_2024-Update
HORVU3Hr1G073540.14 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G085150.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os06g02200 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g42610 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g34720 No alias LOI1, putative, expressed 0.03 Orthogroups_2024-Update
MA_11074g0010 No alias (at3g57430 : 561.0) Encodes a chloroplast RNA editing... 0.04 Orthogroups_2024-Update
MA_115669g0020 No alias (at4g18750 : 620.0) Encodes a pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
MA_122546g0010 No alias (at3g13770 : 499.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
MA_177230g0010 No alias (at2g22070 : 585.0) pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
MA_205762g0010 No alias (at4g02750 : 416.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_20746g0010 No alias (at1g11290 : 522.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
MA_519985g0010 No alias (at3g03580 : 679.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00003163-RA No alias (at3g23330 : 192.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00036565-RA No alias (at4g18750 : 575.0) Encodes a pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
PSME_00050145-RA No alias (at4g13650 : 719.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
Pp1s178_15V6 No alias T1B8.1; pentatricopeptide (PPR) repeat-containing... 0.03 Orthogroups_2024-Update
Pp1s26_188V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.8G250500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G057100.1 No alias RNA editing factor *(OTP85) 0.02 Orthogroups_2024-Update
Seita.9G375400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G272600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G197400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g095690 No alias Pentatricopeptide repeat-containing protein, putative... 0.03 Orthogroups_2024-Update
Sopen01g039430 No alias PPR repeat family 0.04 Orthogroups_2024-Update
Sopen04g026190 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen10g006390 No alias PPR repeat family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 402 428
IPR002885 Pentatricopeptide_repeat 301 327
IPR002885 Pentatricopeptide_repeat 196 222
IPR002885 Pentatricopeptide_repeat 225 272
IPR002885 Pentatricopeptide_repeat 328 375
No external refs found!