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  5. Glyma.10G001500

Glyma.10G001500


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0002876 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002876_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G001500
Cluster HCCA clusters: Cluster_459

Target Alias Description ECC score Gene Family Method Actions
Seita.2G311000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G495400.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 280 324
IPR002885 Pentatricopeptide_repeat 125 173
IPR002885 Pentatricopeptide_repeat 697 741
IPR002885 Pentatricopeptide_repeat 349 393
IPR002885 Pentatricopeptide_repeat 631 658
IPR002885 Pentatricopeptide_repeat 665 694
IPR002885 Pentatricopeptide_repeat 248 276
IPR033443 PPR_long 471 609
No external refs found!