Glyma.10G016100

Description : Pectin lyase-like superfamily protein

Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.10G016100
Cluster	HCCA clusters: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
At3g48950	No alias	Endo-polygalacturonase-like protein...	0.03	Orthogroups_2024-Update
At4g23820	No alias	Pectin lyase-like superfamily protein...	0.03	Orthogroups_2024-Update
Brara.I04239.1	No alias	EC_3.2 glycosylase	0.03	Orthogroups_2024-Update
LOC_Os09g26800	No alias	polygalacturonase, putative, expressed	0.03	Orthogroups_2024-Update
Potri.010G008600	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
Potri.014G112100	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
Sobic.003G223100.1	No alias	EC_3.2 glycosylase	0.03	Orthogroups_2024-Update
Solyc01g094970	No alias	Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G61490.4)	0.03	Orthogroups_2024-Update
Sopen03g003890	No alias	Glycosyl hydrolases family 28	0.03	Orthogroups_2024-Update
Sopen08g030460	No alias	Glycosyl hydrolases family 28	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Predicted GO
MF	GO:0004089	carbonate dehydratase activity	IEP	Predicted GO
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Predicted GO
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Predicted GO
MF	GO:0016836	hydro-lyase activity	IEP	Predicted GO
BP	GO:0030001	metal ion transport	IEP	Predicted GO
MF	GO:0033218	amide binding	IEP	Predicted GO
MF	GO:1901567	fatty acid derivative binding	IEP	Predicted GO
MF	GO:1901681	sulfur compound binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	135	376

External Links

No external refs found!