1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.10G027100

Glyma.10G027100


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0001711 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001711_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G027100
Cluster HCCA clusters: Cluster_419

Target Alias Description ECC score Gene Family Method Actions
evm.model.tig00020801.83 No alias (at3g49660 : 138.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 203 228
IPR001680 WD40_repeat 22 58
IPR001680 WD40_repeat 277 315
IPR001680 WD40_repeat 147 185
IPR001680 WD40_repeat 232 273
IPR001680 WD40_repeat 106 143
IPR001680 WD40_repeat 66 100
No external refs found!