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  5. Glyma.10G031200

Glyma.10G031200


Description : histone H2A 11


Gene families : OG_42_0000970 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G031200
Cluster HCCA clusters: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
At3g54560 No alias Histone H2A [Source:UniProtKB/TrEMBL;Acc:A0A178V944] 0.03 Orthogroups_2024-Update
Brara.D00458.1 No alias histone *(H2A) 0.06 Orthogroups_2024-Update
Brara.I03717.1 No alias histone *(H2A) 0.05 Orthogroups_2024-Update
Cre13.g567700 No alias histone H2A protein 9 0.02 Orthogroups_2024-Update
Glyma.02G143200 No alias histone H2A 11 0.05 Orthogroups_2024-Update
Kfl00107_0200 kfl00107_0200_v1.1 (q84mp7|h2av3_orysa : 187.0) Probable histone H2A... 0.03 Orthogroups_2024-Update
Solyc06g084090 No alias Histone H2A (AHRD V3.3 *** K4CAR4_SOLLC) 0.14 Orthogroups_2024-Update
Sopen06g035480 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
evm.model.tig00021108.27 No alias (q8h7y8|h2av1_orysa : 197.0) Probable histone H2A... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 15 105
IPR032454 Histone_H2A_C 106 135
No external refs found!