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  5. Sopen09g031380

Sopen09g031380


Description : Ribosomal S3Ae family


Gene families : OG_42_0001814 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g031380
Cluster HCCA clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
A4A49_56002 No alias 40s ribosomal protein s3a 0.06 Orthogroups_2024-Update
Bradi1g71200 No alias Ribosomal protein S3Ae 0.03 Orthogroups_2024-Update
Bradi1g78170 No alias Ribosomal protein S3Ae 0.07 Orthogroups_2024-Update
Brara.A00356.1 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Brara.A03750.1 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Brara.C03077.1 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Brara.E03419.1 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Brara.H01188.1 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Cre13.g568650 No alias Ribosomal protein S3Ae 0.05 Orthogroups_2024-Update
GRMZM2G145258 No alias Ribosomal protein S3Ae 0.03 Orthogroups_2024-Update
Glyma.10G245200 No alias Ribosomal protein S3Ae 0.08 Orthogroups_2024-Update
Glyma.11G006600 No alias Ribosomal protein S3Ae 0.05 Orthogroups_2024-Update
HORVU4Hr1G070370.1 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
MA_31004g0010 No alias (at4g34670 : 389.0) Ribosomal protein S3Ae; FUNCTIONS... 0.05 Orthogroups_2024-Update
PSME_00005371-RA No alias (at4g34670 : 408.0) Ribosomal protein S3Ae; FUNCTIONS... 0.02 Orthogroups_2024-Update
Potri.008G156300 No alias Ribosomal protein S3Ae 0.02 Orthogroups_2024-Update
Pp1s179_15V6 No alias 40s ribosomal protein s3a 0.03 Orthogroups_2024-Update
Pp1s17_306V6 No alias 40s ribosomal protein s3a 0.08 Orthogroups_2024-Update
Pp1s219_50V6 No alias 40s ribosomal protein s3a 0.09 Orthogroups_2024-Update
Seita.2G378300.1 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Seita.9G502500.1 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
Sobic.001G431400.2 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Sobic.001G467300.3 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Sobic.002G364100.1 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Sobic.002G364500.1 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Solyc03g097900 No alias 40S ribosomal protein S3a (AHRD V3.3 *** RS3A_TOBAC) 0.03 Orthogroups_2024-Update
Solyc06g072490 No alias 40S ribosomal protein S3a (AHRD V3.3 *** RS3A_TOBAC) 0.07 Orthogroups_2024-Update
Solyc09g082520 No alias 40S ribosomal protein S3a (AHRD V3.3 *** K4CVM9_SOLLC) 0.07 Orthogroups_2024-Update
Sopen06g028860 No alias Ribosomal S3Ae family 0.07 Orthogroups_2024-Update
evm.model.contig_2340.2 No alias (p49397|rs3a_orysa : 304.0) 40S ribosomal protein S3a... 0.11 Orthogroups_2024-Update
evm.model.tig00020710.39 No alias (at4g34670 : 313.0) Ribosomal protein S3Ae; FUNCTIONS... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001593 Ribosomal_S3Ae 16 221
No external refs found!