1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.10G042800

Glyma.10G042800


Description : phytochrome interacting factor 3-like 5


Gene families : OG_42_0000449 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G042800
Cluster HCCA clusters: Cluster_316

Target Alias Description ECC score Gene Family Method Actions
39143 No alias phytochrome interacting factor 3 0.03 Orthogroups_2024-Update
Brara.A00839.1 No alias bHLH-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G115960 No alias phytochrome interacting factor 3 0.03 Orthogroups_2024-Update
Glyma.10G138800 No alias phytochrome interacting factor 3-like 1 0.03 Orthogroups_2024-Update
Seita.1G357200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G160700.1 No alias regulatory protein *(PIF) of red/far-red light... 0.02 Orthogroups_2024-Update
Solyc04g007430 No alias bHLH transcription factor 031 0.02 Orthogroups_2024-Update
Sopen01g044750 No alias Helix-loop-helix DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 280 326
No external refs found!