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  5. Glyma.10G049100

Glyma.10G049100


Description : ubiquitin-protein ligase 4


Gene families : OG_42_0001466 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001466_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G049100
Cluster HCCA clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Bradi3g00350 No alias HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.06 Orthogroups_2024-Update
Bradi5g04567 No alias HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.03 Orthogroups_2024-Update
LOC_Os05g38830 No alias HECT-domain domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10428377g0020 No alias (at4g38600 : 758.0) encodes a member of HECT ubiquitin... 0.03 Orthogroups_2024-Update
MA_62286g0020 No alias (at4g38600 : 823.0) encodes a member of HECT ubiquitin... 0.03 Orthogroups_2024-Update
Mp1g24750.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.02 Orthogroups_2024-Update
PSME_00002631-RA No alias (at4g38600 : 1949.0) encodes a member of HECT ubiquitin... 0.03 Orthogroups_2024-Update
PSME_00021195-RA No alias (at4g38600 : 1459.0) encodes a member of HECT ubiquitin... 0.04 Orthogroups_2024-Update
Pp1s116_90V6 No alias hect ubiquitin-protein 0.02 Orthogroups_2024-Update
Seita.1G001500.1 No alias E3 ubiquitin ligase *(UPL3) 0.03 Orthogroups_2024-Update
Seita.3G213700.1 No alias E3 ubiquitin ligase *(UPL3) 0.03 Orthogroups_2024-Update
Seita.7G028700.1 No alias E3 ubiquitin ligase *(UPL3) 0.05 Orthogroups_2024-Update
Sobic.009G166300.1 No alias E3 ubiquitin ligase *(UPL3) 0.03 Orthogroups_2024-Update
evm.model.tig00020554.37 No alias (at4g38600 : 309.0) encodes a member of HECT ubiquitin... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004325 ferrochelatase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045116 protein neddylation IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000569 HECT_dom 1207 1557
No external refs found!