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  5. Glyma.10G051100

Glyma.10G051100


Description : ubiquitin 4


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G051100
Cluster HCCA clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
228943 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
At4g02890 No alias Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8] 0.05 Orthogroups_2024-Update
Bradi1g32460 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Bradi3g03957 No alias polyubiquitin 3 0.03 Orthogroups_2024-Update
Bradi3g04730 No alias polyubiquitin 10 0.04 Orthogroups_2024-Update
Bradi4g30470 No alias related to ubiquitin 1 0.03 Orthogroups_2024-Update
Brara.I02135.1 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
Glyma.13G176100 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
HORVU5Hr1G019590.12 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G019600.6 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G020140.6 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G021700.4 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G107010.1 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
Kfl00013_0180 kfl00013_0180_v1.... (at5g03240 : 138.0) encodes ubiquitin that is attached... 0.02 Orthogroups_2024-Update
Mp3g22950.1 No alias ubiquitin-fold protein (UBQ) 0.02 Orthogroups_2024-Update
Mp8g11720.1 No alias Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis... 0.03 Orthogroups_2024-Update
Pp1s129_28V6 No alias Putative polyubiquitin 0.05 Orthogroups_2024-Update
Pp1s46_189V6 No alias polyubiquitin 0.06 Orthogroups_2024-Update
Seita.1G282500.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Seita.4G253400.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.002G292500.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.003G403700.1 No alias UBQ ubiquitin-fold protein 0.08 Orthogroups_2024-Update
Sobic.004G049900.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 231 302
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 155 226
No external refs found!