Glyma.10G053500


Description : auxin response factor 16


Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G053500
Cluster HCCA clusters: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
At5g37020 No alias Auxin response factor [Source:UniProtKB/TrEMBL;Acc:A0A178UFA9] 0.03 Orthogroups_2024-Update
Bradi3g40437 No alias Transcriptional factor B3 family protein /... 0.03 Orthogroups_2024-Update
Brara.G01136.1 No alias ARF-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G179121 No alias auxin response factor 16 0.03 Orthogroups_2024-Update
Glyma.10G210600 No alias auxin response factor 16 0.03 Orthogroups_2024-Update
Glyma.15G091000 No alias auxin response factor 8 0.03 Orthogroups_2024-Update
HORVU3Hr1G096510.5 No alias ARF-type transcription factor 0.02 Orthogroups_2024-Update
Pp1s341_4V6 No alias arf1-binding protein 0.03 Orthogroups_2024-Update
Sopen01g045470 No alias Auxin response factor 0.02 Orthogroups_2024-Update
Sopen09g002650 No alias Auxin response factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
BP GO:0009725 response to hormone IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006007 glucose catabolic process IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019320 hexose catabolic process IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0046365 monosaccharide catabolic process IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 118 219
IPR010525 Auxin_resp 287 370
No external refs found!