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  5. Glyma.10G055700

Glyma.10G055700


Description : TTF-type zinc finger protein with HAT dimerisation domain


Gene families : OG_42_0000176 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G055700
Cluster HCCA clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Bradi5g16026 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.03 Orthogroups_2024-Update
Brara.J00849.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.01G155700 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.04 Orthogroups_2024-Update
Glyma.03G160800 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.04 Orthogroups_2024-Update
Glyma.05G074700 No alias General transcription factor 2-related zinc finger protein 0.05 Orthogroups_2024-Update
Glyma.13G083900 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.05 Orthogroups_2024-Update
Glyma.13G203500 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.04 Orthogroups_2024-Update
Glyma.17G071500 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.04 Orthogroups_2024-Update
Glyma.17G248000 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.04 Orthogroups_2024-Update
Glyma.18G099300 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.03 Orthogroups_2024-Update
Glyma.18G214900 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.04 Orthogroups_2024-Update
Glyma.19G084500 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.04 Orthogroups_2024-Update
Glyma.19G129100 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.05 Orthogroups_2024-Update
Glyma.U036600 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.04 Orthogroups_2024-Update
HORVU3Hr1G016400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os08g27290 No alias hAT dimerisation domain-containing protein, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 637 696
IPR025398 DUF4371 115 350
No external refs found!