Sopen09g031880


Description : HhH-GPD superfamily base excision DNA repair protein


Gene families : OG_42_0004747 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004747_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g031880
Cluster HCCA clusters: Cluster_346

Target Alias Description ECC score Gene Family Method Actions
A4A49_32200 No alias endonuclease iii-like 2, chloroplastic 0.03 Orthogroups_2024-Update
GRMZM2G113228 No alias DNA glycosylase superfamily protein 0.02 Orthogroups_2024-Update
evm.model.tig00000378.10 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006284 base-excision repair IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003265 HhH-GPD_domain 139 262
IPR000445 HhH_motif 205 232
No external refs found!