Glyma.10G089800


Description : RING/U-box superfamily protein


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G089800
Cluster HCCA clusters: Cluster_539

Target Alias Description ECC score Gene Family Method Actions
A4A49_41488 No alias e3 ubiquitin-protein ligase rduf1 0.05 Orthogroups_2024-Update
At3g13228 No alias RING/U-box superfamily protein... 0.05 Orthogroups_2024-Update
At3g60080 No alias At3g60080 [Source:UniProtKB/TrEMBL;Acc:Q9M1D5] 0.03 Orthogroups_2024-Update
Bradi3g34010 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g38870 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.C03342.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G00930.1 No alias E3 ubiquitin ligase *(SNIPER) 0.03 Orthogroups_2024-Update
Brara.G02768.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H02157.1 No alias E3 ubiquitin ligase *(SNIPER) 0.03 Orthogroups_2024-Update
Glyma.17G108900 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G002870.3 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g09820 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g26420 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_474338g0010 No alias (at2g39720 : 83.2) Encodes a putative RING-H2 finger... 0.02 Orthogroups_2024-Update
Potri.001G103900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G036700 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.013G116000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G086500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Seita.3G157000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G208100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G253600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G031500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G172700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g009000 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G56580.3) 0.03 Orthogroups_2024-Update
Solyc04g005740 No alias LOW QUALITY:RING/U-box superfamily protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen02g015860 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 169 208
No external refs found!