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  5. Glyma.10G100400

Glyma.10G100400


Description : CCCH-type zinc finger protein with ARM repeat domain


Gene families : OG_42_0002653 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002653_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G100400
Cluster HCCA clusters: Cluster_320

Target Alias Description ECC score Gene Family Method Actions
At5g12850 No alias Zinc finger CCCH domain-containing protein 56... 0.03 Orthogroups_2024-Update
Kfl00028_0220 kfl00028_0220_v1.1 (at2g41900 : 319.0) CCCH-type zinc finger protein with... 0.02 Orthogroups_2024-Update
MA_88000g0010 No alias (at2g41900 : 462.0) CCCH-type zinc finger protein with... 0.03 Orthogroups_2024-Update
Solyc10g079120 No alias Zinc finger transcription factor 60 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 58 127
IPR000571 Znf_CCCH 276 296
No external refs found!