Description : Pectin lyase-like superfamily protein
Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.10G138100 | |
Cluster | HCCA clusters: Cluster_245 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
78556 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.18G236700 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.19G213400 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
LOC_Os09g26800 | No alias | polygalacturonase, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_10436451g0020 | No alias | (at4g23500 : 273.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | InterProScan predictions |
BP | GO:0005975 | carbohydrate metabolic process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Predicted GO |
MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Predicted GO |
BP | GO:0006099 | tricarboxylic acid cycle | IEP | Predicted GO |
BP | GO:0006101 | citrate metabolic process | IEP | Predicted GO |
BP | GO:0007034 | vacuolar transport | IEP | Predicted GO |
MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Predicted GO |
MF | GO:0009055 | electron transfer activity | IEP | Predicted GO |
BP | GO:0015977 | carbon fixation | IEP | Predicted GO |
BP | GO:0016999 | antibiotic metabolic process | IEP | Predicted GO |
MF | GO:0030151 | molybdenum ion binding | IEP | Predicted GO |
CC | GO:0031360 | intrinsic component of thylakoid membrane | IEP | Predicted GO |
CC | GO:0031361 | integral component of thylakoid membrane | IEP | Predicted GO |
MF | GO:0034061 | DNA polymerase activity | IEP | Predicted GO |
BP | GO:0042126 | nitrate metabolic process | IEP | Predicted GO |
BP | GO:0042128 | nitrate assimilation | IEP | Predicted GO |
BP | GO:0071941 | nitrogen cycle metabolic process | IEP | Predicted GO |
BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:2001057 | reactive nitrogen species metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 138 | 417 |
No external refs found! |