Description : nucleotide repair protein, putative
Gene families : OG_42_0008310 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008310_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.10G156300 | |
Cluster | HCCA clusters: Cluster_384 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
evm.model.contig_3438.5 | No alias | (at3g05210 : 162.0) encodes a homolog of human ERCC1... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003684 | damaged DNA binding | IEA | InterProScan predictions |
MF | GO:0004519 | endonuclease activity | IEA | InterProScan predictions |
CC | GO:0005634 | nucleus | IEA | InterProScan predictions |
BP | GO:0006281 | DNA repair | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0004392 | heme oxygenase (decyclizing) activity | IEP | Predicted GO |
MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006553 | lysine metabolic process | IEP | Predicted GO |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006788 | heme oxidation | IEP | Predicted GO |
MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | Predicted GO |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009085 | lysine biosynthetic process | IEP | Predicted GO |
BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
BP | GO:0016567 | protein ubiquitination | IEP | Predicted GO |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Predicted GO |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | Predicted GO |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0042168 | heme metabolic process | IEP | Predicted GO |
BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:0046451 | diaminopimelate metabolic process | IEP | Predicted GO |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004579 | ERCC1/RAD10/SWI10 | 113 | 220 |
No external refs found! |