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  5. Sopen09g032850

Sopen09g032850


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g032850
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
80895 No alias ethylene responsive element binding factor 2 0.02 Orthogroups_2024-Update
A4A49_15668 No alias ethylene-responsive transcription factor rap2-12 0.02 Orthogroups_2024-Update
A4A49_28228 No alias ethylene-responsive transcription factor erf017 0.02 Orthogroups_2024-Update
At4g25490 No alias DRE/CRT-binding factor 1 [Source:UniProtKB/TrEMBL;Acc:B6DTR3] 0.03 Orthogroups_2024-Update
Bradi2g52370 No alias erf domain protein 9 0.01 Orthogroups_2024-Update
Brara.C03619.1 No alias subgroup ERF-VII transcription factor & transcription... 0.02 Orthogroups_2024-Update
Brara.E02969.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.03 Orthogroups_2024-Update
Brara.G02403.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K00687.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G376255 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G112700 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.06G295300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G098330.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G080340.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G062380.3 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g34260 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g08500 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_100577g0010 No alias (at5g21960 : 112.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_10431529g0030 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_164803g0010 No alias (at5g11590 : 119.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_329325g0010 No alias (at4g17500 : 94.0) Encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
MA_4032g0010 No alias (q9sxs8|erf3_tobac : 85.1) Ethylene-responsive... 0.03 Orthogroups_2024-Update
MA_8574268g0010 No alias (at5g11590 : 123.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00008897-RA No alias (at4g17500 : 88.2) Encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
PSME_00051454-RA No alias (at1g19210 : 98.6) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Pp1s41_212V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.2G156200.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Seita.6G023700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G080400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g065980 No alias Ethylene Response Factor E.4 0.02 Orthogroups_2024-Update
Solyc01g095500 No alias Sl Cytokinin Response Factor 5 0.02 Orthogroups_2024-Update
Solyc02g077370 No alias Ethylene Response Factor C.5 0.02 Orthogroups_2024-Update
Solyc09g091950 No alias Ethylene-responsive transcription factor ERF062 (AHRD... 0.01 Orthogroups_2024-Update
Solyc10g076370 No alias Dehydration-responsive element binding protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc11g042560 No alias Ethylene-responsive transcription factor ERF021 family... 0.02 Orthogroups_2024-Update
Solyc12g056980 No alias Ethylene-responsive element binding-factor (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen02g033000 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen03g001530 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen03g005140 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen08g026680 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen10g028030 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 19 70
No external refs found!