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  5. Glyma.10G200300

Glyma.10G200300


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0004970 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004970_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G200300
Cluster HCCA clusters: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
At3g10530 No alias F18K10.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9LPP3] 0.03 Orthogroups_2024-Update
Bradi1g04226 No alias Transducin/WD40 repeat-like superfamily protein 0.06 Orthogroups_2024-Update
Brara.A03475.1 No alias SSU processome assembly factor *(UTP7) 0.05 Orthogroups_2024-Update
Cre12.g502800 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.010G232500 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Orthogroups_2024-Update
Pp1s45_24V6 No alias hypothetical protein [Oryza sativa (japonica cultivar-group)] 0.03 Orthogroups_2024-Update
Seita.5G049800.1 No alias SSU processome assembly factor *(UTP7) 0.05 Orthogroups_2024-Update
Solyc05g008190 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.05 Orthogroups_2024-Update
evm.model.tig00001366.4 No alias (at3g10530 : 195.0) Transducin/WD40 repeat-like... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0098599 palmitoyl hydrolase activity IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 277 308
IPR012952 BING4_C_dom 355 434
No external refs found!