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  5. Glyma.10G213500

Glyma.10G213500


Description : LOB domain-containing protein 1


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G213500
Cluster HCCA clusters: Cluster_396

Target Alias Description ECC score Gene Family Method Actions
Brara.I00295.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
Glyma.02G234600 No alias LOB domain-containing protein 13 0.04 Orthogroups_2024-Update
HORVU4Hr1G084750.2 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g07480 No alias DUF260 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_19975g0010 No alias (at2g28500 : 96.3) LOB domain-containing protein 11... 0.04 Orthogroups_2024-Update
MA_361391g0010 No alias (at1g07900 : 123.0) LOB domain-containing protein 1... 0.02 Orthogroups_2024-Update
PSME_00022409-RA No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
PSME_00039447-RA No alias (at2g28500 : 163.0) LOB domain-containing protein 11... 0.03 Orthogroups_2024-Update
Seita.9G149300.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G005000.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Solyc06g062630 No alias LOB domain-containing protein, putative (AHRD V3.3 *-*... 0.06 Orthogroups_2024-Update
Solyc06g064540 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc11g045530 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Sopen11g004610 No alias Protein of unknown function DUF260 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 69 166
No external refs found!