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  5. Glyma.10G224200

Glyma.10G224200


Description : Ribosomal protein S13/S18 family


Gene families : OG_42_0001811 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G224200
Cluster HCCA clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
267619 No alias S18 ribosomal protein 0.07 Orthogroups_2024-Update
A4A49_58029 No alias 40s ribosomal protein s18 0.05 Orthogroups_2024-Update
Bradi1g05670 No alias Ribosomal protein S13/S18 family 0.05 Orthogroups_2024-Update
Bradi1g55980 No alias Ribosomal protein S13/S18 family 0.06 Orthogroups_2024-Update
Brara.C02618.1 No alias component *(uS13) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Brara.E01935.1 No alias component *(uS13) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Brara.I02318.1 No alias component *(uS13) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Brara.I02440.1 No alias component *(uS13) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Cre06.g272950 No alias Ribosomal protein S13/S18 family 0.07 Orthogroups_2024-Update
GRMZM2G130544 No alias Ribosomal protein S13/S18 family 0.07 Orthogroups_2024-Update
Glyma.20G169900 No alias Ribosomal protein S13/S18 family 0.03 Orthogroups_2024-Update
HORVU5Hr1G104720.1 No alias component *(uS13) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
LOC_Os07g07709 No alias ribosomal protein S13p/S18e, putative, expressed 0.04 Orthogroups_2024-Update
MA_10429265g0010 No alias (at4g09800 : 256.0) encodes a ribosomal protein S18C, a... 0.03 Orthogroups_2024-Update
Mp1g07420.1 No alias component RPS18 of SSU proteome 0.06 Orthogroups_2024-Update
Mp5g02820.1 No alias component RPS18 of SSU proteome 0.03 Orthogroups_2024-Update
Pp1s14_433V6 No alias 40s ribosomal protein s18 0.08 Orthogroups_2024-Update
Pp1s215_71V6 No alias 40s ribosomal protein s18 0.07 Orthogroups_2024-Update
Pp1s215_81V6 No alias 40s ribosomal protein s18 0.1 Orthogroups_2024-Update
Pp1s242_94V6 No alias 40s ribosomal protein s18 0.08 Orthogroups_2024-Update
Seita.2G048400.1 No alias component *(uS13) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Seita.5G053700.1 No alias component *(uS13) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Sobic.001G058900.1 No alias component *(uS13) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Sobic.002G049300.1 No alias component *(uS13) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Solyc03g078290 No alias Ribosomal protein S13 (AHRD V3.3 *** A0A103XPA4_CYNCS) 0.05 Orthogroups_2024-Update
Solyc06g073370 No alias Ribosomal protein S13 (AHRD V3.3 *** A0A103XPA4_CYNCS) 0.02 Orthogroups_2024-Update
Solyc11g005680 No alias Ribosomal protein S13 (AHRD V3.3 *** A0A103XPA4_CYNCS) 0.03 Orthogroups_2024-Update
Sopen03g021040 No alias Ribosomal protein S13/S18 0.04 Orthogroups_2024-Update
Sopen11g001640 No alias Ribosomal protein S13/S18 0.02 Orthogroups_2024-Update
evm.model.contig_2176.2 No alias (at4g09800 : 195.0) encodes a ribosomal protein S18C, a... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 14 142
No external refs found!