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  5. Glyma.10G249000

Glyma.10G249000


Description : photosystem I subunit D-2


Gene families : OG_42_0006268 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G249000
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
A4A49_07455 No alias photosystem i reaction center subunit ii, chloroplastic 0.17 Orthogroups_2024-Update
A4A49_20575 No alias photosystem i reaction center subunit ii, chloroplastic 0.09 Orthogroups_2024-Update
At1g03130 No alias Photosystem I reaction center subunit II-2,... 0.07 Orthogroups_2024-Update
At4g02770 No alias Photosystem I reaction center subunit II-1,... 0.06 Orthogroups_2024-Update
Bradi1g04700 No alias photosystem I subunit D-2 0.14 Orthogroups_2024-Update
Brara.I00185.1 No alias component *(PsaD) of PS-I complex 0.1 Orthogroups_2024-Update
Cre05.g238332 No alias photosystem I subunit D-2 0.11 Orthogroups_2024-Update
GRMZM2G024150 No alias photosystem I subunit D-2 0.04 Orthogroups_2024-Update
HORVU5Hr1G109710.1 No alias component *(PsaD) of PS-I complex 0.08 Orthogroups_2024-Update
Kfl00193_0150 kfl00193_0150_v1.1 (p12353|psad_spiol : 246.0) Photosystem I reaction... 0.11 Orthogroups_2024-Update
MA_9169733g0010 No alias (p32869|psad_cucsa : 194.0) Photosystem I reaction... 0.07 Orthogroups_2024-Update
Mp5g04200.1 No alias component PsaD of PS-I complex 0.11 Orthogroups_2024-Update
Pp1s1_788V6 No alias psi reaction center subunit ii 0.16 Orthogroups_2024-Update
Pp1s4_321V6 No alias psi reaction center subunit ii 0.18 Orthogroups_2024-Update
Pp1s77_69V6 No alias psi reaction center subunit ii 0.16 Orthogroups_2024-Update
Seita.9G045100.1 No alias component *(PsaD) of PS-I complex 0.03 Orthogroups_2024-Update
Sobic.001G046900.1 No alias component *(PsaD) of PS-I complex 0.11 Orthogroups_2024-Update
Solyc06g054260 No alias photosystem 1 reaction center protein subunit 2 0.11 Orthogroups_2024-Update
Sopen06g019380 No alias PsaD 0.11 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009538 photosystem I reaction center IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015995 chlorophyll biosynthetic process IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003685 PsaD 78 208
No external refs found!