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  5. Glyma.10G257500

Glyma.10G257500


Description : ROOT HAIR DEFECTIVE 6-LIKE 2


Gene families : OG_42_0000539 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000539_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G257500
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
At1g66470 No alias RHD6 [Source:UniProtKB/TrEMBL;Acc:A0A178W430] 0.03 Orthogroups_2024-Update
Glyma.20G133600 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
Seita.1G292900.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Seita.5G075100.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 280 320
No external refs found!