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  5. Sopen09g033520

Sopen09g033520


Description : Eukaryotic initiation factor 4E


Gene families : OG_42_0002011 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g033520
Cluster HCCA clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
At1g29550 No alias Eukaryotic translation initiation factor 4E-3... 0.03 Orthogroups_2024-Update
Cre03.g199900 No alias Eukaryotic initiation factor 4E protein 0.01 Orthogroups_2024-Update
Glyma.13G222400 No alias eukaryotic translation initiation factor 4E 0.04 Orthogroups_2024-Update
Mp1g06030.1 No alias component eIF4E of eIF4F mRNA unwinding complex.... 0.04 Orthogroups_2024-Update
PSME_00043497-RA No alias (o81481|if4e1_maize : 150.0) Eukaryotic translation... 0.01 Orthogroups_2024-Update
evm.model.tig00000310.61 No alias (p48599|if4e1_orysa : 152.0) Eukaryotic translation... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0003743 translation initiation factor activity IEA InterProScan predictions
CC GO:0005737 cytoplasm IEA InterProScan predictions
BP GO:0006413 translational initiation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001040 TIF_eIF_4E 27 178
No external refs found!