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  5. Glyma.11G007400

Glyma.11G007400


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0004009 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004009_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G007400
Cluster HCCA clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Bradi1g08840 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Solyc09g082390 No alias Pentatricopeptide repeat superfamily protein, putative... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR033443 PPR_long 345 511
IPR002885 Pentatricopeptide_repeat 296 340
IPR002885 Pentatricopeptide_repeat 200 225
IPR002885 Pentatricopeptide_repeat 265 294
No external refs found!