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  5. Sopen09g034220

Sopen09g034220


Description : GATA zinc finger


Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g034220
Cluster HCCA clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
A4A49_15410 No alias gata transcription factor 12 0.03 Orthogroups_2024-Update
A4A49_15701 No alias gata transcription factor 1 0.02 Orthogroups_2024-Update
A4A49_17145 No alias gata transcription factor 8 0.04 Orthogroups_2024-Update
Bradi1g78540 No alias GATA transcription factor 2 0.02 Orthogroups_2024-Update
Bradi3g50160 No alias GATA transcription factor 4 0.02 Orthogroups_2024-Update
Bradi4g41570 No alias GATA transcription factor 9 0.02 Orthogroups_2024-Update
Brara.A00355.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Brara.B01250.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Brara.G01891.1 No alias transcription factor *(A/B-GATA) 0.06 Orthogroups_2024-Update
Brara.I04178.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Brara.K01308.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Glyma.03G118100 No alias GATA transcription factor 2 0.03 Orthogroups_2024-Update
Glyma.04G051300 No alias cytokinin-responsive gata factor 1 0.02 Orthogroups_2024-Update
Glyma.08G187300 No alias GATA transcription factor 29 0.02 Orthogroups_2024-Update
Glyma.16G139400 No alias GATA type zinc finger transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.17G192800 No alias GATA transcription factor 12 0.04 Orthogroups_2024-Update
HORVU1Hr1G076000.1 No alias transcription factor *(A/B-GATA) 0.04 Orthogroups_2024-Update
HORVU6Hr1G061140.2 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
PSME_00001982-RA No alias (at5g25830 : 153.0) Encodes a member of the GATA factor... 0.02 Orthogroups_2024-Update
Potri.014G124400 No alias GATA transcription factor 16 0.03 Orthogroups_2024-Update
Potri.019G033000 No alias GATA transcription factor 9 0.02 Orthogroups_2024-Update
Potri.T172039 No alias GATA transcription factor 12 0.03 Orthogroups_2024-Update
Seita.1G358400.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Sobic.008G179800.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Sobic.009G050600.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
evm.model.tig00001094.21 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000679 Znf_GATA 195 229
No external refs found!