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  5. Glyma.11G052200

Glyma.11G052200


Description : end binding protein 1C


Gene families : OG_42_0001138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G052200
Cluster HCCA clusters: Cluster_336

Target Alias Description ECC score Gene Family Method Actions
48832 No alias end binding protein 1C 0.02 Orthogroups_2024-Update
At5g67270 No alias EB1C [Source:UniProtKB/TrEMBL;Acc:A0A178UNG3] 0.04 Orthogroups_2024-Update
Mp3g01400.1 No alias microtubule plus-end-tracking protein (EB1). MT... 0.02 Orthogroups_2024-Update
Potri.005G142200 No alias end binding protein 1C 0.03 Orthogroups_2024-Update
Solyc02g092950 No alias RP/EB family microtubule-associated protein (AHRD V3.3... 0.06 Orthogroups_2024-Update
Sopen02g037510 No alias EB1-like C-terminal motif 0.04 Orthogroups_2024-Update
evm.model.contig_570.4 No alias (at5g67270 : 105.0) encodes a homolog of animal... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008017 microtubule binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0000796 condensin complex IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR004953 EB1_C 210 248
IPR001715 CH-domain 16 109
No external refs found!